Applied Biosystems™ Axiom™ Maize Genotyping Array
On demandApplied Biosystems™ Axiom™ Maize Genotyping Array
Axiom Maize Genotyping Array was designed by the AgroClustER Synbreed (funded by the German Ministry of Education and Research, BMBF) through a collaboration led by Professor Chris-Carolin Schön, Dr. Eva Bauer, and Sandra Unterseer (Technische Universität München, Germany), and Dr. Georg Haberer and Michael Seidel (Helmholtz Zentrum Mnchen, Germany) through Affymetrix Expert Design Program.* The array interrogates 616,201 carefully selected polymorphic variants to represent the global diversity in the maize genome.
The array overcomes specific challenges caused by a high content of repetitive elements, high genomic and structural diversity, and low linkage disequilibrium (LD) in different cultivars. The SNPs on the array were first discovered through resequencing in a panel of 30 inbred lines that represented global diversity. The array was validated by using a diverse set of European, US, and tropical/semi-tropical lines from various Dent and Flint gene pools.
Features
- Comprehensive content – 616,201 variants including 609,442 SNPs and 6,759 small insertion/deletion variants
Related Products
- Applied Biosystems™ GeneChip™ Maize Genome Array, 6 Arrays: 900615
- Applied Biosystems™ GeneChip™ Maize Genome Array, 2 Arrays: 900614
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